Transcript: EXTL3-AS1:1

Basic information

LNCipedia transcript ID: EXTL3-AS1:1 
LNCipedia gene ID: EXTL3-AS1
Location (hg38): chr8:28698900-28701613
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2714 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT125754
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.4703 non-coding 
CPAT coding probability 64.26% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
EXTL3-AS1:1 yes no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-INTS9-1:9
4.0 EXTL3-AS1:1
4.1 EXTL3-AS1:1
5.0 EXTL3-AS1:1
5.1 EXTL3-AS1:1
5.2 EXTL3-AS1:1