Transcript: F10-AS1:1

Basic information

LNCipedia transcript ID: F10-AS1:1 
LNCipedia gene ID: F10-AS1
RefSeq ID: NR_126424
Location (hg38): chr13:113128155-113130046
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 455 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126424; NR_126424.1
Alternative gene names: ; F10-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.1513 non-coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
F10-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCID2-2:2
4.0 F10-AS1:1
4.1 F10-AS1:1
5.0 F10-AS1:1
5.1 F10-AS1:1
5.2 F10-AS1:1