Transcript: FALEC:1

Basic information

LNCipedia transcript ID: FALEC:1 
LNCipedia gene ID: FALEC
Location (hg38): chr1:150514953-150522860
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7908 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT006300
Alternative gene names: ncRNA-a1; FAL1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.9745 non-coding 
CPAT coding probability 39.56% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
FALEC:1 no no no no

Available literature

  1. Hu (2014), A functional genomic approach identifies FAL1 as an oncogenic long noncoding RNA that associates with BMI1 and represses p21 expression in cancer., Cancer Cell
  2. Ørom (2010), Long noncoding RNAs with enhancer-like function in human cells., Cell


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ECM1-1:2
4.0 FALEC:1
4.1 FALEC:1
5.0 FALEC:1
5.1 FALEC:1
5.2 FALEC:1