Transcript: FAM111A-DT:26

Basic information

LNCipedia transcript ID: FAM111A-DT:26 
LNCipedia gene ID: FAM111A-DT
Location (hg38): chr11:59133973-59142808
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2246 bp
Exons: 4
Sources: Refseq - Dec 2014
Alternative transcript names: NR_110184
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.717 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM111A-DT:26 no no no no

Available literature

  1. Kim (2017), Epidermal long non-coding RNAs are regulated by ultraviolet irradiation., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MPEG1-2:8
4.0 lnc-MPEG1-2:8
4.1 lnc-MPEG1-2:8
5.0 lnc-MPEG1-2:8
5.1 FAM111A-DT:9
5.2 FAM111A-DT:26