Transcript: FAM167A-AS1:2

Basic information

LNCipedia transcript ID: FAM167A-AS1:2 
HGNC Gene Symbol: FAM167A-AS1    
HGNC Full Gene Name: FAM167A antisense RNA 1
Ensembl Gene ID: ENSG00000184608
Ensembl Transcript ID: ENST00000533578
RefSeq ID: NR_026814
Location (hg38): chr8:11368402-11438657
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1222 bp
Exons: 7
Sources: Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_026814; ENST00000533578.4; NR_026814.1
Alternative gene names: ENSG00000184608.8; FAM167A-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.4231 non-coding 
CPAT coding probability 9.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM167A-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C8orf12-1:2
4.0 FAM167A-AS1:2
4.1 FAM167A-AS1:2
5.0 FAM167A-AS1:2
5.1 FAM167A-AS1:2
5.2 FAM167A-AS1:2