Transcript: FAM181A-AS1:2

Basic information

LNCipedia transcript ID: FAM181A-AS1:2 
HGNC Gene Symbol: FAM181A-AS1    
HGNC Full Gene Name: FAM181A antisense RNA 1
Ensembl Gene ID: ENSG00000258584
Ensembl Transcript ID: ENST00000554538
Location (hg38): chr14:93923673-93926966
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 545 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000554538.1; FAM181A-AS1-002; OTTHUMT00000412837.1; NONHSAT039356
Alternative gene names: ENSG00000258584.1; FAM181A-AS1; OTTHUMG00000171296.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.055 non-coding 
CPAT coding probability 10.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM181A-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ASB2-2:2
4.0 FAM181A-AS1:2
4.1 FAM181A-AS1:2
5.0 FAM181A-AS1:2
5.1 FAM181A-AS1:2
5.2 FAM181A-AS1:2