Transcript: FAM181A-AS1:3

Basic information

LNCipedia transcript ID: FAM181A-AS1:3 
HGNC Gene Symbol: FAM181A-AS1    
HGNC Full Gene Name: FAM181A antisense RNA 1
Ensembl Gene ID: ENSG00000258584
Ensembl Transcript ID: ENST00000554742
RefSeq ID: NR_027004
Location (hg38): chr14:93904730-93926372
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2402 bp
Exons: 11
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000554742.1; FAM181A-AS1-001; OTTHUMT00000412835.1; NONHSAT039352; NR_027004; NR_027004.1
Alternative gene names: ENSG00000258584.1; FAM181A-AS1; OTTHUMG00000171296.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.2922 non-coding 
CPAT coding probability 33.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM181A-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ASB2-2:3
4.0 FAM181A-AS1:3
4.1 FAM181A-AS1:3
5.0 FAM181A-AS1:3
5.1 FAM181A-AS1:3
5.2 FAM181A-AS1:3