Transcript: FAM182A:39

Basic information

LNCipedia transcript ID: FAM182A:39 
LNCipedia gene ID: FAM182A
Location (hg38): chr20:26059663-26093047
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 992 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT079215; ENST00000415411.1
Alternative gene names: ENSG00000125804.9; FAM182A


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.9844 non-coding 
CPAT coding probability 27.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM182A:39 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM182A-4:4
4.0 lnc-FAM182A-4:4
4.1 lnc-FAM182A-4:4
5.0 lnc-FAM182A-4:4
5.1 FAM182A:19
5.2 FAM182A:39