Transcript: FAM197Y5:7

Basic information

LNCipedia transcript ID: FAM197Y5:7 
HGNC Gene Symbol: FAM197Y5    
HGNC Full Gene Name: family with sequence similarity 197 Y-linked member 5
Ensembl Gene ID: ENSG00000225516
Ensembl Transcript ID: ENST00000619815
RefSeq ID: NR_046300
Location (hg38): chrY:9458743-9464345
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 467 bp
Exons: 4
Sources: Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_001553; NR_046300; ENST00000619815.4; NR_046300.1
Alternative gene names: ENSG00000225516.6; FAM197Y5; FAM197Y5P


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 40.3292 non-coding 
CPAT coding probability 19.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM197Y5:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC006156.1-7:1
4.0 lnc-AC006156.1-7:1
4.1 lnc-AC006156.1-7:1
5.0 lnc-AC006156.1-7:1
5.1 FAM197Y5:4
5.2 FAM197Y5:7