Transcript: FAM198B-AS1:31

Basic information

LNCipedia transcript ID: FAM198B-AS1:31 
LNCipedia gene ID: FAM198B-AS1
Location (hg38): chr4:158198719-158200833
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2021 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT098989; FPKM1_group_24371_transcript_8
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.273 non-coding 
CPAT coding probability 8.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM198B-AS1:31 no no no no

Available literature

  1. Wang (2016), LncRNAs expression profiling in normal ovary, benign ovarian cyst and malignant epithelial ovarian cancer., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM144-1:9
4.0 lnc-TMEM144-1:9
4.1 lnc-TMEM144-1:9
5.0 lnc-TMEM144-1:9
5.1 FAM198B-AS1:22
5.2 FAM198B-AS1:31