Transcript: FAM215B:1

Basic information

LNCipedia transcript ID: FAM215B:1 
HGNC Gene Symbol: FAM215B    
HGNC Full Gene Name: family with sequence similarity 215 member B
Ensembl Gene ID: ENSG00000232300
Ensembl Transcript ID: ENST00000458392
Location (hg38): chr17:46558830-46562795
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2183 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000458392.1; FAM215B-001; OTTHUMT00000255751.1; NONHSAT054213
Alternative gene names: ENSG00000232300.1; FAM215B; OTTHUMG00000132549.1; ARL17A-IT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.7823 non-coding 
CPAT coding probability 35.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM215B:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARL17B-1:1
4.0 FAM215B:1
4.1 FAM215B:1
5.0 FAM215B:1
5.1 FAM215B:1
5.2 FAM215B:1