Transcript: FAM222A-AS1:10

Basic information

LNCipedia transcript ID: FAM222A-AS1:10 
LNCipedia gene ID: FAM222A-AS1
Location (hg38): chr12:109734166-109773484
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 847 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255650.1|ENST00000541723.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -228.1862 non-coding 
CPAT coding probability 21.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM222A-AS1:10 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 FAM222A-AS1:10
5.0 FAM222A-AS1:10
5.1 FAM222A-AS1:10
5.2 FAM222A-AS1:10