Transcript: FAM225A:1

Basic information

LNCipedia transcript ID: FAM225A:1 
LNCipedia gene ID: FAM225A
Location (hg38): chr9:113112896-113119844
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5800 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00015556
Alternative gene names: XLOC_007523; linc-SLC31A2-1; DKFZp686A0127


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.6427 non-coding 
CPAT coding probability 64.86% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
FAM225A:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLC31A2-1:1
3.1 lnc-SLC31A2-1:1
4.0 FAM225A:1
4.1 FAM225A:1
5.0 FAM225A:1
5.1 FAM225A:1
5.2 FAM225A:1