Transcript: FAM225B:3

Basic information

LNCipedia transcript ID: FAM225B:3 
HGNC Gene Symbol: FAM225B    
HGNC Full Gene Name: family with sequence similarity 225 member B
Ensembl Gene ID: ENSG00000225684
Ensembl Transcript ID: ENST00000439875
Location (hg38): chr9:113103338-113111473
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7380 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000439875; ENST00000439875.1; LINC00256B-002; OTTHUMT00000144714.2; NONHSAT134032
Alternative gene names: ENSG00000225684; NCRNA00256B; ENSG00000225684.3; LINC00256B; OTTHUMG00000020515.3; FAM225B;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.1838 non-coding 
CPAT coding probability 62.86% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
FAM225B:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZFP37-2:2
3.1 lnc-ZFP37-2:2
4.0 FAM225B:3
4.1 FAM225B:3
5.0 FAM225B:3
5.1 FAM225B:3
5.2 FAM225B:3