Transcript: FAM242D:4

Basic information

LNCipedia transcript ID: FAM242D:4 
LNCipedia gene ID: FAM242D
Location (hg38): chr9:61615875-61627683
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 719 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000419207; ENST00000419207.1; RP11-160N1.9-001; OTTHUMT00000143914.1; NONHSAT131394
Alternative gene names: ENSG00000231248; RP11-160N1.9; ENSG00000231248.1; OTTHUMG00000067216.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.4918 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM242D:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-160N1.10.1-1:1
3.1 lnc-RP11-160N1.10.1-1:1
4.0 lnc-RP11-160N1.10.1-1:1
4.1 lnc-RP11-160N1.10.1-1:1
5.0 lnc-RP11-160N1.10.1-1:1
5.1 FAM242D:2
5.2 FAM242D:4