Transcript: FAM41AY2:4

Basic information

LNCipedia transcript ID: FAM41AY2:4 
LNCipedia gene ID: FAM41AY2
Location (hg38): chrY:18389270-18405046
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2043 bp
Exons: 10
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Refseq - Dec 2014
Alternative transcript names: ENST00000458627; ENST00000458627.1; FAM41AY2-001; OTTHUMT00000100029.1; NONHSAT139572; NR_028083; NR_028084
Alternative gene names: ENSG00000226362; FAM41AY2; ENSG00000226362.1; OTTHUMG00000041973.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.3001 non-coding 
CPAT coding probability 10.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM41AY2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HSFY2-2:1
3.1 lnc-HSFY2-4:1
4.0 lnc-HSFY2-4:1
4.1 lnc-HSFY2-4:1
5.0 lnc-HSFY2-4:1
5.1 FAM41AY2:2
5.2 FAM41AY2:4