Transcript: FAM41AY2:5

Basic information

LNCipedia transcript ID: FAM41AY2:5 
HGNC Gene Symbol: FAM41AY2    
HGNC Full Gene Name: family with sequence similarity 41 member A, Y-linked 2
Ensembl Gene ID: ENSG00000226362
Ensembl Transcript ID: ENST00000458627
Location (hg38): chrY:18390994-18405046
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 906 bp
Exons: 7
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT147777; ENST00000458627.2
Alternative gene names: ENSG00000226362.2; FAM41AY2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.5814 non-coding 
CPAT coding probability 11.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM41AY2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HSFY2-4:2
4.0 lnc-HSFY2-4:2
4.1 lnc-HSFY2-4:2
5.0 lnc-HSFY2-4:2
5.1 FAM41AY2:3
5.2 FAM41AY2:5