Transcript: FAM83C-AS1:2

Basic information

LNCipedia transcript ID: FAM83C-AS1:2 
LNCipedia gene ID: FAM83C-AS1
RefSeq ID: NR_109815
Location (hg38): chr20:35285251-35285772
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 368 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109815; NR_109815.1
Alternative gene names: dJ614O4.3; FAM83C-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -262.4172 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM83C-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MMP24-1:2
4.0 FAM83C-AS1:2
4.1 FAM83C-AS1:2
5.0 FAM83C-AS1:2
5.1 FAM83C-AS1:2
5.2 FAM83C-AS1:2