Transcript: FANK1-AS1:1

Basic information

LNCipedia transcript ID: FANK1-AS1:1 
LNCipedia gene ID: FANK1-AS1
RefSeq ID: NR_102707
Location (hg38): chr10:125972188-125973273
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 446 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT016925; NR_102707; NR_102707.1
Alternative gene names: ; FANK1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.2814 non-coding 
CPAT coding probability 5.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FANK1-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ADAM12-1:2
4.0 FANK1-AS1:1
4.1 FANK1-AS1:1
5.0 FANK1-AS1:1
5.1 FANK1-AS1:1
5.2 FANK1-AS1:1