Transcript: FBXL19-AS1:4

Basic information

LNCipedia transcript ID: FBXL19-AS1:4 
LNCipedia gene ID: FBXL19-AS1
Location (hg38): chr16:30919319-30923266
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3948 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260852.1|ENST00000563777.1
Alternative gene names: MGC125469; MGC125470; MGC125472


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.138 non-coding 
CPAT coding probability 15.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FBXL19-AS1:4 yes no no no

Available literature

  1. Shen (2017), Long non-coding RNA FBXL19-AS1 plays oncogenic role in colorectal cancer by sponging miR-203., Biochem. Biophys. Res. Commun.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 FBXL19-AS1:4
5.0 FBXL19-AS1:4
5.1 FBXL19-AS1:4
5.2 FBXL19-AS1:4