Transcript: FGF12-AS1:2

Basic information

LNCipedia transcript ID: FGF12-AS1:2 
HGNC Gene Symbol: FGF12-AS1    
HGNC Full Gene Name: FGF12 antisense RNA 1
Ensembl Gene ID: ENSG00000231383
Ensembl Transcript ID: ENST00000414920
RefSeq ID: NR_046596
Location (hg38): chr3:192238630-192283097
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 580 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000414920.2; FGF12-AS1-001; OTTHUMT00000343158.2; NONHSAT093995; NR_046596.1
Alternative gene names: ENSG00000231383.2; FGF12-AS1; OTTHUMG00000156141.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -144.1152 non-coding 
CPAT coding probability 2.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FGF12-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PYDC2-4:2
4.0 FGF12-AS1:2
4.1 FGF12-AS1:2
5.0 FGF12-AS1:2
5.1 FGF12-AS1:2
5.2 FGF12-AS1:2