Transcript: FILNC1:24

Basic information

LNCipedia transcript ID: FILNC1:24 
LNCipedia gene ID: FILNC1
Location (hg38): chr6:139856762-139859702
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 476 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT115262
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -211.7725 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FILNC1:24 no no no no

Available literature

  1. Xiao (2017), Energy stress-induced lncRNA FILNC1 represses c-Myc-mediated energy metabolism and inhibits renal tumor development., Nat Commun


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HECA-2:4
4.0 lnc-HECA-2:4
4.1 lnc-HECA-2:4
5.0 lnc-HECA-2:4
5.1 FILNC1:15
5.2 FILNC1:24