Transcript: FLG-AS1:12

Basic information

LNCipedia transcript ID: FLG-AS1:12 
HGNC Gene Symbol: FLG-AS1    
HGNC Full Gene Name: FLG antisense RNA 1
Ensembl Gene ID: ENSG00000237975
Ensembl Transcript ID: ENST00000411804
Location (hg38): chr1:152373954-152445456
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 707 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000411804.1; RP1-91G5.3-001; OTTHUMT00000034508.1; NONHSAT006486
Alternative gene names: ENSG00000227415.1; RP1-91G5.3; OTTHUMG00000012388.1; ENSG00000237975.6; FLG-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -136.6926 non-coding 
CPAT coding probability 4.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FLG-AS1:12 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LCE5A-1:1
4.0 FLG-AS1:12
4.1 FLG-AS1:12
5.0 FLG-AS1:12
5.1 FLG-AS1:12
5.2 FLG-AS1:12