Transcript: FLNC-AS1:7

Basic information

LNCipedia transcript ID: FLNC-AS1:7 
LNCipedia gene ID: FLNC-AS1
Location (hg38): chr7:128879921-128882101
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1065 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT123268
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 140.8311 coding 
CPAT coding probability 38.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
FLNC-AS1:7 no no no no

Available literature

  1. Qian (2017), LncRNA expression profile of ΔNp63α in cervical squamous cancers and its suppressive effects on LIF expression., Cytokine
  2. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TNPO3-1:18
4.0 lnc-TNPO3-1:18
4.1 lnc-TNPO3-1:18
5.0 lnc-TNPO3-1:18
5.1 FLNC-AS1:2
5.2 FLNC-AS1:7