Transcript: FOXD3-AS1:10

Basic information

LNCipedia transcript ID: FOXD3-AS1:10 
LNCipedia gene ID: FOXD3-AS1
Location (hg38): chr1:63320921-63322345
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 401 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT003670
Alternative gene names: pasFOXD3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.4428 non-coding 
CPAT coding probability 13.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FOXD3-AS1:10 no no no no

Available literature

  1. Zhang (2017), Long noncoding RNA FOXD3-AS1 regulates oxidative stress-induced apoptosis <i>via</i> sponging microRNA-150., FASEB J.
  2. Chen (2016), Down-regulation of long non-coding RNA FOXD3 antisense RNA 1 (FOXD3-AS1) inhibits cell proliferation, migration, and invasion in malignant glioma cells., Am J Transl Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITGB3BP-1:6
4.0 FOXD3-AS1:10
4.1 FOXD3-AS1:10
5.0 FOXD3-AS1:10
5.1 FOXD3-AS1:10
5.2 FOXD3-AS1:10