Transcript: FOXD3-AS1:13

Basic information

LNCipedia transcript ID: FOXD3-AS1:13 
LNCipedia gene ID: FOXD3-AS1
Location (hg38): chr1:63319650-63323742
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3892 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230798.1|ENCT00000026840.1
Alternative gene names: pasFOXD3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.7835 non-coding 
CPAT coding probability 68.97% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
FOXD3-AS1:13 yes no no no

Available literature

  1. Zhang (2017), Long noncoding RNA FOXD3-AS1 regulates oxidative stress-induced apoptosis <i>via</i> sponging microRNA-150., FASEB J.
  2. Chen (2016), Down-regulation of long non-coding RNA FOXD3 antisense RNA 1 (FOXD3-AS1) inhibits cell proliferation, migration, and invasion in malignant glioma cells., Am J Transl Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 FOXD3-AS1:13
5.0 FOXD3-AS1:13
5.1 FOXD3-AS1:13
5.2 FOXD3-AS1:13