Transcript: FOXD3-AS1:23

Basic information

LNCipedia transcript ID: FOXD3-AS1:23 
LNCipedia gene ID: FOXD3-AS1
Location (hg38): chr1:63320884-63321632
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 573 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230798.1|ENST00000426393.1
Alternative gene names: pasFOXD3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -192.4106 non-coding 
CPAT coding probability 1.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FOXD3-AS1:23 no no no no

Available literature

  1. Zhang (2017), Long noncoding RNA FOXD3-AS1 regulates oxidative stress-induced apoptosis <i>via</i> sponging microRNA-150., FASEB J.
  2. Chen (2016), Down-regulation of long non-coding RNA FOXD3 antisense RNA 1 (FOXD3-AS1) inhibits cell proliferation, migration, and invasion in malignant glioma cells., Am J Transl Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 FOXD3-AS1:23
5.0 FOXD3-AS1:23
5.1 FOXD3-AS1:23
5.2 FOXD3-AS1:23