Transcript: FRG1-DT:29

Basic information

LNCipedia transcript ID: FRG1-DT:29 
LNCipedia gene ID: FRG1-DT
Location (hg38): chr4:189821085-189864838
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 827 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT099799
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -235.7712 non-coding 
CPAT coding probability 0.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FRG1-DT:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FRG2-2:6
4.0 lnc-FRG2-2:6
4.1 lnc-FRG2-2:6
5.0 lnc-FRG2-2:6
5.1 FRG1-DT:15
5.2 FRG1-DT:29