Transcript: FRMD6-AS2:3

Basic information

LNCipedia transcript ID: FRMD6-AS2:3 
HGNC Gene Symbol: FRMD6-AS2    
HGNC Full Gene Name: FRMD6 antisense RNA 2
Ensembl Gene ID: ENSG00000258537
Ensembl Transcript ID: ENST00000557625
Location (hg38): chr14:51546629-51599920
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 581 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000557625; ENST00000557625.1; FRMD6-AS2-002; OTTHUMT00000411556.1; NONHSAT036850
Alternative gene names: ENSG00000258537; RP11-255G12.5; ENSG00000258537.1; FRMD6-AS2; OTTHUMG00000171076.1; ENSG00000258537.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -109.6882 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FRMD6-AS2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-463J10.2.1-2:2
3.1 lnc-RP11-463J10.2.1-2:2
4.0 FRMD6-AS2:3
4.1 FRMD6-AS2:3
5.0 FRMD6-AS2:3
5.1 FRMD6-AS2:3
5.2 FRMD6-AS2:3