Transcript: FRMPD4-AS1:1

Basic information

LNCipedia transcript ID: FRMPD4-AS1:1 
HGNC Gene Symbol: FRMPD4-AS1    
HGNC Full Gene Name: FRMPD4 antisense RNA 1
Ensembl Gene ID: ENSG00000223487
Ensembl Transcript ID: ENST00000425057
Location (hg38): chrX:12373167-12375133
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 285 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000425057.1; FRMPD4-AS1-001; OTTHUMT00000055767.1; NONHSAT136267
Alternative gene names: ENSG00000223487.1; FRMPD4-AS1; OTTHUMG00000021135.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.2817 non-coding 
CPAT coding probability 15.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FRMPD4-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM9C-2:1
4.0 FRMPD4-AS1:1
4.1 FRMPD4-AS1:1
5.0 FRMPD4-AS1:1
5.1 FRMPD4-AS1:1
5.2 FRMPD4-AS1:1