Transcript: FZD10-DT:48

Basic information

LNCipedia transcript ID: FZD10-DT:48 
LNCipedia gene ID: FZD10-DT
Location (hg38): chr12:130150349-130162223
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 4159 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000505807; ENST00000505807.2; RP11-143E21.7-001; OTTHUMT00000399504.1; NONHSAT031955
Alternative gene names: ENSG00000250208; RP11-143E21.7; ENSG00000250208.2; OTTHUMG00000168379.1; FZD10-AS1; FLJ31485


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.8532 non-coding 
CPAT coding probability 4.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FZD10-DT:48 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RIMBP2-4:7
3.1 lnc-TMEM132D-3:5
4.0 FZD10-AS1:8
4.1 FZD10-AS1:8
5.0 FZD10-AS1:8
5.1 FZD10-DT:21
5.2 FZD10-DT:48