Transcript: G2E3-AS1:13

Basic information

LNCipedia transcript ID: G2E3-AS1:13 
HGNC Gene Symbol: G2E3-AS1    
HGNC Full Gene Name: G2E3 antisense RNA 1
Ensembl Gene ID: ENSG00000257636
Ensembl Transcript ID: ENST00000550680
Location (hg38): chr14:30438006-30474227
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 471 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000550680.1; RP11-1103G16.1-002; OTTHUMT00000409435.1; NONHSAT036225; ENST00000550680.5
Alternative gene names: ENSG00000257636.1; RP11-1103G16.1; OTTHUMG00000170510.1; ENSG00000257636.2; ENSG00000257636.6; G2E3-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.9094 non-coding 
CPAT coding probability 1.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
G2E3-AS1:13 no no no no

Available literature

  1. Dudek (2017), Identification of long non-coding RNAs that stimulate cell survival in bladder cancer., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRKD1-2:4
4.0 lnc-PRKD1-2:4
4.1 lnc-PRKD1-2:4
5.0 lnc-PRKD1-2:4
5.1 G2E3-AS1:6
5.2 G2E3-AS1:13