Transcript: GAS5-AS1:2

Basic information

LNCipedia transcript ID: GAS5-AS1:2 
HGNC Gene Symbol: GAS5-AS1    
HGNC Full Gene Name: GAS5 antisense RNA 1
Ensembl Gene ID: ENSG00000270084
Ensembl Transcript ID: ENST00000602767
RefSeq ID: NR_037605
Location (hg38): chr1:173863248-173863941
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 694 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT007661; NR_037605; ENST00000602767.1; NR_037605.1
Alternative gene names: ENSG00000270084.1; GAS5-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.6861 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GAS5-AS1:2 no no no no

Available literature

  1. Lin (2017), LncRNA GAS5-AS1 inhibits myofibroblasts activities in oral submucous fibrosis., J. Formos. Med. Assoc.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DARS2-1:2
4.0 GAS5-AS1:2
4.1 GAS5-AS1:2
5.0 GAS5-AS1:2
5.1 GAS5-AS1:2
5.2 GAS5-AS1:2