Transcript: GAS6-DT:17

Basic information

LNCipedia transcript ID: GAS6-DT:17 
LNCipedia gene ID: GAS6-DT
Location (hg38): chr13:113864175-113870571
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5112 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272695.1|ENCT00000116531.1
Alternative gene names: FLJ44054


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.7579 non-coding 
CPAT coding probability 0.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GAS6-DT:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 GAS6-AS2:10
5.0 GAS6-AS2:10
5.1 GAS6-DT:7
5.2 GAS6-DT:17