Transcript: GAS6-DT:20

Basic information

LNCipedia transcript ID: GAS6-DT:20 
LNCipedia gene ID: GAS6-DT
Location (hg38): chr13:113864209-113866817
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1792 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021918; NONHSAT035386
Alternative gene names: XLOC_010514; linc-CDC16-5; FLJ44054


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.1002 non-coding 
CPAT coding probability 18.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GAS6-DT:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM70B-1:2
3.1 lnc-FAM70B-2:2
4.0 GAS6-AS2:4
4.1 GAS6-AS2:4
5.0 GAS6-AS2:4
5.1 GAS6-DT:10
5.2 GAS6-DT:20