Transcript: GATA3-AS1:5
Basic information
LNCipedia transcript ID: GATA3-AS1:5
HGNC Gene Symbol: GATA3-AS1
HGNC Full Gene Name:
GATA3 antisense RNA 1
Ensembl Gene ID:
ENSG00000197308
Ensembl Transcript ID:
ENST00000458727
RefSeq ID:
NR_104327
Location (hg38): chr10:8052243-8053449
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 820 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00017730; ENST00000458727; ENST00000458727.1; RP11-379F12.3-001; OTTHUMT00000046722.1; NONHSAT011314; NR_104327; NR_104327.1
Alternative gene names: XLOC_008724; linc-KIN-5; ENSG00000243350; RP11-379F12.3; ENSG00000243350.1; OTTHUMG00000017641.1; ; ENSG00000197308.9; GATA3-AS1
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Available literature
- Spurlock (2015), Expression and functions of long noncoding RNAs during human T helper cell differentiation., Nat Commun
- Qin (2014), Expression pattern of long non-coding RNAs in renal cell carcinoma revealed by microarray., PLoS ONE
- Zhang (2013), Profiling of human CD4+ T-cell subsets identifies the TH2-specific noncoding RNA GATA3-AS1., J. Allergy Clin. Immunol.
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
1.3 | lnc-KIN-1:4 |
3.1 | lnc-KIN-2:4 |
4.0 | GATA3-AS1:5 |
4.1 | GATA3-AS1:5 |
5.0 | GATA3-AS1:5 |
5.1 | GATA3-AS1:5 |
5.2 | GATA3-AS1:5 |