Transcript: GCC2-AS1:3

Basic information

LNCipedia transcript ID: GCC2-AS1:3 
LNCipedia gene ID: GCC2-AS1
Location (hg38): chr2:108505187-108534117
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 871 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA802:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -51.0531 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GCC2-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 GCC2-AS1:3
4.1 GCC2-AS1:3
5.0 GCC2-AS1:3
5.1 GCC2-AS1:3
5.2 GCC2-AS1:3