Transcript: GCC2-AS1:9

Basic information

LNCipedia transcript ID: GCC2-AS1:9 
LNCipedia gene ID: GCC2-AS1
Location (hg38): chr2:108505059-108534201
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1083 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000214184.3|FTMT20500068538.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -39.2705 non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GCC2-AS1:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 GCC2-AS1:9
5.0 GCC2-AS1:9
5.1 GCC2-AS1:9
5.2 GCC2-AS1:9