Transcript: GHET1:3

Basic information

LNCipedia transcript ID: GHET1:3 
LNCipedia gene ID: GHET1
RefSeq ID: NR_130107
Location (hg38): chr7:148987527-148989429
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1903 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_130107.1
Alternative gene names: GHET1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -96.1767 non-coding 
CPAT coding probability 1.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GHET1:3 no no no no

Available literature

  1. Yang (2014), Long non-coding RNA GHET1 promotes gastric carcinoma cell proliferation by increasing c-Myc mRNA stability., FEBS J.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 GHET1:3
5.1 GHET1:3
5.2 GHET1:3