Transcript: GLIDR:1

Basic information

LNCipedia transcript ID: GLIDR:1 
LNCipedia gene ID: GLIDR
RefSeq ID: NR_126046
Location (hg38): chr9:39803496-39810159
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1038 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126046; NR_126046.1
Alternative gene names: MGC21881; TCONS_00015562; GLIDR


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 89.7512 coding 
CPAT coding probability 1.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
GLIDR:1 no no no no

Available literature

  1. Zhang (2017), Increased expression of long non-coding RNA GLIDR in prostate cancer., Cancer Biomark
  2. Zhang (2013), A long non-coding RNA signature in glioblastoma multiforme predicts survival., Neurobiol. Dis.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM75A4-2:12
4.0 GLIDR:1
4.1 GLIDR:1
5.0 GLIDR:1
5.1 GLIDR:1
5.2 GLIDR:1