Transcript: GLIS2-AS1:5

Basic information

LNCipedia transcript ID: GLIS2-AS1:5 
LNCipedia gene ID: GLIS2-AS1
Location (hg38): chr16:4317548-4328323
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 7936 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000262686.1|ENCT00000163232.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -62.2221 non-coding 
CPAT coding probability 77.98% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
GLIS2-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 GLIS2-AS1:5
5.0 GLIS2-AS1:5
5.1 GLIS2-AS1:5
5.2 GLIS2-AS1:5