Transcript: GMDS-DT:118

Basic information

LNCipedia transcript ID: GMDS-DT:118 
LNCipedia gene ID: GMDS-DT
Location (hg38): chr6:2336459-2342129
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5671 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT106648
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.0782 non-coding 
CPAT coding probability 77.34% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
GMDS-DT:118 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WRNIP1-36:2
4.0 lnc-WRNIP1-36:2
4.1 GMDS-AS1:69
5.0 GMDS-AS1:69
5.1 GMDS-DT:48
5.2 GMDS-DT:118