Transcript: GMDS-DT:120

Basic information

LNCipedia transcript ID: GMDS-DT:120 
LNCipedia gene ID: GMDS-DT
Location (hg38): chr6:2343865-2426168
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 566 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003mtu_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.7717 non-coding 
CPAT coding probability 2.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GMDS-DT:120 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WRNIP1-2:39
4.0 GMDS-AS1:27
4.1 GMDS-AS1:27
5.0 GMDS-AS1:27
5.1 GMDS-DT:50
5.2 GMDS-DT:120