Transcript: GMDS-DT:122

Basic information

LNCipedia transcript ID: GMDS-DT:122 
LNCipedia gene ID: GMDS-DT
Location (hg38): chr6:2391546-2413548
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8467 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011149; NONHSAT106655
Alternative gene names: XLOC_005127; linc-WRNIP1-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.0188 non-coding 
CPAT coding probability 40.60% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
GMDS-DT:122 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WRNIP1-2:24
3.1 lnc-WRNIP1-2:24
4.0 GMDS-AS1:29
4.1 GMDS-AS1:29
5.0 GMDS-AS1:29
5.1 GMDS-DT:52
5.2 GMDS-DT:122