Transcript: GMDS-DT:131

Basic information

LNCipedia transcript ID: GMDS-DT:131 
LNCipedia gene ID: GMDS-DT
Location (hg38): chr6:2398577-2398916
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 253 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1786:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -147.8089 non-coding 
CPAT coding probability 2.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GMDS-DT:131 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 GMDS-AS1:38
4.1 GMDS-AS1:38
5.0 GMDS-AS1:38
5.1 GMDS-DT:61
5.2 GMDS-DT:131