Transcript: GMDS-DT:132

Basic information

LNCipedia transcript ID: GMDS-DT:132 
LNCipedia gene ID: GMDS-DT
Location (hg38): chr6:2398589-2481037
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 566 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011646; NONHSAT106662
Alternative gene names: XLOC_005127; linc-WRNIP1-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -138.199 non-coding 
CPAT coding probability 2.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GMDS-DT:132 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WRNIP1-2:31
3.1 lnc-WRNIP1-2:31
4.0 GMDS-AS1:39
4.1 GMDS-AS1:39
5.0 GMDS-AS1:39
5.1 GMDS-DT:62
5.2 GMDS-DT:132