Transcript: GMDS-DT:133

Basic information

LNCipedia transcript ID: GMDS-DT:133 
HGNC Gene Symbol: GMDS-DT    
HGNC Full Gene Name: GMDS divergent transcript
Ensembl Gene ID: ENSG00000250903
Ensembl Transcript ID: ENST00000607519
Location (hg38): chr6:2398657-2481118
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 579 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607519.1
Alternative gene names: ENSG00000250903.4; GMDS-AS1; ENSG00000250903.8;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -138.199 non-coding 
CPAT coding probability 1.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GMDS-DT:133 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WRNIP1-2:42
4.0 GMDS-AS1:40
4.1 GMDS-AS1:40
5.0 GMDS-AS1:40
5.1 GMDS-DT:63
5.2 GMDS-DT:133