Transcript: GMDS-DT:136

Basic information

LNCipedia transcript ID: GMDS-DT:136 
LNCipedia gene ID: GMDS-DT
Location (hg38): chr6:2398982-2413196
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 473 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00012393
Alternative gene names: XLOC_005127; linc-WRNIP1-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -138.199 non-coding 
CPAT coding probability 0.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GMDS-DT:136 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WRNIP1-2:34
3.1 lnc-WRNIP1-2:34
4.0 GMDS-AS1:43
4.1 GMDS-AS1:43
5.0 GMDS-AS1:43
5.1 GMDS-DT:66
5.2 GMDS-DT:136