Transcript: GMDS-DT:73

Basic information

LNCipedia transcript ID: GMDS-DT:73 
LNCipedia gene ID: GMDS-DT
RefSeq ID: NR_046229
Location (hg38): chr6:2245753-2413591
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1588 bp
Exons: 7
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT106620; NR_046229; NR_046229.1
Alternative gene names: ; GMDS-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.3785 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GMDS-DT:73 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WRNIP1-2:36
4.0 GMDS-AS1:2
4.1 GMDS-AS1:2
5.0 GMDS-AS1:2
5.1 GMDS-DT:3
5.2 GMDS-DT:73