Transcript: GMDS-DT:74

Basic information

LNCipedia transcript ID: GMDS-DT:74 
LNCipedia gene ID: GMDS-DT
Location (hg38): chr6:2245756-2329337
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 669 bp
Exons: 5
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1150:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -8.1846 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GMDS-DT:74 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 GMDS-AS1:3
4.1 GMDS-AS1:3
5.0 GMDS-AS1:3
5.1 GMDS-DT:4
5.2 GMDS-DT:74